Hand-book for Travellers in Egypt; Including Descriptions of the Course of the Nile to the Second Cataract, Alexandria, Cairo, the Pyramids, and Thebes, the Overland Transit to India, the Peninsula of Mount Sinai, the Oases, &c. Being a New Edition, corrected and condensed, of "Modern Egypt and Thebes". London, John Murray, 1847.

Memoirs. With a Full Account of the Great Malaria Problem and its Solution. London, John Murray, 1923.

Primitive Culture: Researches into the Development of Mythology, Philosophy, Religion, Language, Art, and Custom. London, John Murray, 1871.

Researches into the Early History of Mankind and the Development of Civilization. London, John Murray, 1865.

Rude Stone Monuments in all Countries: Their Age and Uses. London, John Murray, 1872.

Studies on Malaria. London, John Murray, [1928].

The beloved physician, Sir James Mackenzie : a biography. London, John Murray, [1946?]

The Expression of the Emotions in Man and Animals. With photographic and other illustrations. London, John Murray, 1872.

The Geological Evidences of the Antiquity of Man with Remarks on Theories of the Origin of Species by Variation. Second editon, revised. London, John Murray, 1863.

The Geological Evidences of the Antiquity of Man with Remarks on Theories of the Origin of Species by Variation. Third editon, revised. London, John Murray, 1863.

The modern practice of physic exhibiting the characters, causes, symptoms, prognostic, morbid appearances, and improved method of treating, the diseases of all climates. Third Edition, corrected, and considerably enlarged. London, Printed for John Murray, 1810.

The Naturalist on the River Amazons. A Record of Adventures, Habits of Animals, Sketches of Brazilian and Indian Life, and Aspects of Nature under the Equator, during eleven Years of Travel. Fifth Edition. London, John Murray, 1884.

The Prevention of Malaria. With contributions by L.O. Howard et al. London, John Murray, 1910.

Thoughts on Animalcules; or, a Glimpse of the Invisible World Revealed by the Microscope. London, John Murray, 1846.